Phytophthora parsiana sp. nov., a new high-temperature tolerant species.
Identifieur interne : 001C47 ( Main/Exploration ); précédent : 001C46; suivant : 001C48Phytophthora parsiana sp. nov., a new high-temperature tolerant species.
Auteurs : R. Mostowfizadeh-Ghalamfarsa [Iran] ; D E L. Cooke ; Z. BanihashemiSource :
- Mycological research [ 0953-7562 ] ; 2008.
Descripteurs français
- KwdFr :
- ADN fongique (génétique), ADN ribosomique (génétique), Agar-agar (MeSH), Arbres (MeSH), Espaceur de l'ADN ribosomique (génétique), Gènes fongiques (génétique), Milieux de culture (MeSH), Phylogenèse (MeSH), Phytophthora (classification), Phytophthora (croissance et développement), Phytophthora (génétique), Phytophthora (isolement et purification), Pistacia (microbiologie), Température (MeSH), Température élevée (MeSH).
- MESH :
- croissance et développement : Phytophthora.
- génétique : ADN fongique, ADN ribosomique, Espaceur de l'ADN ribosomique, Gènes fongiques, Phytophthora.
- isolement et purification : Phytophthora.
- microbiologie : Pistacia.
- Agar-agar, Arbres, Milieux de culture, Phylogenèse, Température, Température élevée.
English descriptors
- KwdEn :
- Agar (MeSH), Culture Media (MeSH), DNA, Fungal (genetics), DNA, Ribosomal (genetics), DNA, Ribosomal Spacer (genetics), Genes, Fungal (genetics), Hot Temperature (MeSH), Phylogeny (MeSH), Phytophthora (classification), Phytophthora (genetics), Phytophthora (growth & development), Phytophthora (isolation & purification), Pistacia (microbiology), Temperature (MeSH), Trees (MeSH).
- MESH :
- chemical , genetics : DNA, Fungal, DNA, Ribosomal, DNA, Ribosomal Spacer.
- chemical : Agar, Culture Media.
- classification : Phytophthora.
- genetics : Genes, Fungal, Phytophthora.
- growth & development : Phytophthora.
- isolation & purification : Phytophthora.
- microbiology : Pistacia.
- Hot Temperature, Phylogeny, Temperature, Trees.
Abstract
As part of a study to examine the phylogenetic history of the taxonomically challenging species Phytophthora cryptogea and P. drechsleri, a distinct monophyletic group of isolates, previously described as P. drechsleri or P. cryptogea, were characterised. Analysis of their rDNA ITS sequences indicated that these isolates were distinct from P. drechsleri, P. cryptogea, and all members of Phytophthora ITS clades 1-8, clustering instead alongside basal groups previously described as clades 9 and 10. This group comprised six isolates all of which were isolated from woody plants, such as pistachio (Pistacia vera, Iran and USA), fig (Ficus carica, Iran), and almond (Prunus dulcis, Greece). Analysis of sequence data from nuclear (beta-tubulin and translation elongation factor 1alpha) and mitochondrial (cytochrome c oxidase subunit I) genes confirmed the ITS-based analysis as these isolates formed a distinct monophyletic group in all NJ trees. The isolates were fast growing with a relatively high optimum growth temperature of 30 degrees C and, in most cases, rapid colony growth even at 37 degrees C. The isolates produced complex colony patterns on almost all media, especially corn meal agar (CMA). Phylogenetic analysis and examination of all the other morphological and physiological data lead us to infer that this taxon has not been described previously. As this taxon was first isolated and described from Iran we propose that this taxon be formally designated as Phytophthora parsiana.
DOI: 10.1016/j.mycres.2008.01.011
PubMed: 18501580
Affiliations:
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Cooke</name></author><author><name sortKey="Banihashemi, Z" sort="Banihashemi, Z" uniqKey="Banihashemi Z" first="Z" last="Banihashemi">Z. Banihashemi</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2008">2008</date><idno type="RBID">pubmed:18501580</idno><idno type="pmid">18501580</idno><idno type="doi">10.1016/j.mycres.2008.01.011</idno><idno type="wicri:Area/Main/Corpus">001D94</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001D94</idno><idno type="wicri:Area/Main/Curation">001D94</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001D94</idno><idno type="wicri:Area/Main/Exploration">001D94</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Phytophthora parsiana sp. nov., a new high-temperature tolerant species.</title><author><name sortKey="Mostowfizadeh Ghalamfarsa, R" sort="Mostowfizadeh Ghalamfarsa, R" uniqKey="Mostowfizadeh Ghalamfarsa R" first="R" last="Mostowfizadeh-Ghalamfarsa">R. Mostowfizadeh-Ghalamfarsa</name><affiliation wicri:level="1"><nlm:affiliation>Department of Plant Protection, College of Agriculture, Shiraz University, Bajgah, Shiraz, Iran. rmostofi@shirazu.ac.ir </nlm:affiliation> <country xml:lang="fr">Iran</country><wicri:regionArea>Department of Plant Protection, College of Agriculture, Shiraz University, Bajgah, Shiraz</wicri:regionArea><wicri:noRegion>Shiraz</wicri:noRegion></affiliation></author><author><name sortKey="Cooke, D E L" sort="Cooke, D E L" uniqKey="Cooke D" first="D E L" last="Cooke">D E L. Cooke</name></author><author><name sortKey="Banihashemi, Z" sort="Banihashemi, Z" uniqKey="Banihashemi Z" first="Z" last="Banihashemi">Z. Banihashemi</name></author></analytic><series><title level="j">Mycological research</title><idno type="ISSN">0953-7562</idno><imprint><date when="2008" type="published">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Agar (MeSH)</term><term>Culture Media (MeSH)</term><term>DNA, Fungal (genetics)</term><term>DNA, Ribosomal (genetics)</term><term>DNA, Ribosomal Spacer (genetics)</term><term>Genes, Fungal (genetics)</term><term>Hot Temperature (MeSH)</term><term>Phylogeny (MeSH)</term><term>Phytophthora (classification)</term><term>Phytophthora (genetics)</term><term>Phytophthora (growth & development)</term><term>Phytophthora (isolation & purification)</term><term>Pistacia (microbiology)</term><term>Temperature (MeSH)</term><term>Trees (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN fongique (génétique)</term><term>ADN ribosomique (génétique)</term><term>Agar-agar (MeSH)</term><term>Arbres (MeSH)</term><term>Espaceur de l'ADN ribosomique (génétique)</term><term>Gènes fongiques (génétique)</term><term>Milieux de culture (MeSH)</term><term>Phylogenèse (MeSH)</term><term>Phytophthora (classification)</term><term>Phytophthora (croissance et développement)</term><term>Phytophthora (génétique)</term><term>Phytophthora (isolement et purification)</term><term>Pistacia (microbiologie)</term><term>Température (MeSH)</term><term>Température élevée (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Fungal</term><term>DNA, Ribosomal</term><term>DNA, Ribosomal Spacer</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Agar</term><term>Culture Media</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genes, Fungal</term><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN fongique</term><term>ADN ribosomique</term><term>Espaceur de l'ADN ribosomique</term><term>Gènes fongiques</term><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Pistacia</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Pistacia</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Hot Temperature</term><term>Phylogeny</term><term>Temperature</term><term>Trees</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Agar-agar</term><term>Arbres</term><term>Milieux de culture</term><term>Phylogenèse</term><term>Température</term><term>Température élevée</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">As part of a study to examine the phylogenetic history of the taxonomically challenging species Phytophthora cryptogea and P. drechsleri, a distinct monophyletic group of isolates, previously described as P. drechsleri or P. cryptogea, were characterised. Analysis of their rDNA ITS sequences indicated that these isolates were distinct from P. drechsleri, P. cryptogea, and all members of Phytophthora ITS clades 1-8, clustering instead alongside basal groups previously described as clades 9 and 10. This group comprised six isolates all of which were isolated from woody plants, such as pistachio (Pistacia vera, Iran and USA), fig (Ficus carica, Iran), and almond (Prunus dulcis, Greece). Analysis of sequence data from nuclear (beta-tubulin and translation elongation factor 1alpha) and mitochondrial (cytochrome c oxidase subunit I) genes confirmed the ITS-based analysis as these isolates formed a distinct monophyletic group in all NJ trees. The isolates were fast growing with a relatively high optimum growth temperature of 30 degrees C and, in most cases, rapid colony growth even at 37 degrees C. The isolates produced complex colony patterns on almost all media, especially corn meal agar (CMA). Phylogenetic analysis and examination of all the other morphological and physiological data lead us to infer that this taxon has not been described previously. As this taxon was first isolated and described from Iran we propose that this taxon be formally designated as Phytophthora parsiana.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18501580</PMID><DateCompleted><Year>2008</Year><Month>11</Month><Day>13</Day></DateCompleted><DateRevised><Year>2008</Year><Month>11</Month><Day>21</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0953-7562</ISSN><JournalIssue CitedMedium="Print"><Volume>112</Volume><Issue>Pt 7</Issue><PubDate><Year>2008</Year><Month>Jul</Month></PubDate></JournalIssue><Title>Mycological research</Title><ISOAbbreviation>Mycol Res</ISOAbbreviation></Journal><ArticleTitle>Phytophthora parsiana sp. nov., a new high-temperature tolerant species.</ArticleTitle><Pagination><MedlinePgn>783-94</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.mycres.2008.01.011</ELocationID><Abstract><AbstractText>As part of a study to examine the phylogenetic history of the taxonomically challenging species Phytophthora cryptogea and P. drechsleri, a distinct monophyletic group of isolates, previously described as P. drechsleri or P. cryptogea, were characterised. Analysis of their rDNA ITS sequences indicated that these isolates were distinct from P. drechsleri, P. cryptogea, and all members of Phytophthora ITS clades 1-8, clustering instead alongside basal groups previously described as clades 9 and 10. This group comprised six isolates all of which were isolated from woody plants, such as pistachio (Pistacia vera, Iran and USA), fig (Ficus carica, Iran), and almond (Prunus dulcis, Greece). Analysis of sequence data from nuclear (beta-tubulin and translation elongation factor 1alpha) and mitochondrial (cytochrome c oxidase subunit I) genes confirmed the ITS-based analysis as these isolates formed a distinct monophyletic group in all NJ trees. The isolates were fast growing with a relatively high optimum growth temperature of 30 degrees C and, in most cases, rapid colony growth even at 37 degrees C. The isolates produced complex colony patterns on almost all media, especially corn meal agar (CMA). Phylogenetic analysis and examination of all the other morphological and physiological data lead us to infer that this taxon has not been described previously. As this taxon was first isolated and described from Iran we propose that this taxon be formally designated as Phytophthora parsiana.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Mostowfizadeh-Ghalamfarsa</LastName><ForeName>R</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Department of Plant Protection, College of Agriculture, Shiraz University, Bajgah, Shiraz, Iran. rmostofi@shirazu.ac.ir </Affiliation> </AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cooke</LastName><ForeName>D E L</ForeName><Initials>DE</Initials></Author><Author ValidYN="Y"><LastName>Banihashemi</LastName><ForeName>Z</ForeName><Initials>Z</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2008</Year><Month>02</Month><Day>12</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mycol Res</MedlineTA><NlmUniqueID>8913481</NlmUniqueID><ISSNLinking>0953-7562</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D003470">Culture Media</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004275">DNA, Ribosomal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D021903">DNA, Ribosomal Spacer</NameOfSubstance></Chemical><Chemical><RegistryNumber>9002-18-0</RegistryNumber><NameOfSubstance UI="D000362">Agar</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000362" MajorTopicYN="N">Agar</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003470" MajorTopicYN="N">Culture Media</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004275" MajorTopicYN="N">DNA, Ribosomal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D021903" MajorTopicYN="N">DNA, Ribosomal Spacer</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005800" MajorTopicYN="N">Genes, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006358" MajorTopicYN="N">Hot Temperature</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D027927" MajorTopicYN="N">Pistacia</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013696" MajorTopicYN="N">Temperature</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2007</Year><Month>02</Month><Day>21</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2008</Year><Month>01</Month><Day>02</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2008</Year><Month>01</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2008</Year><Month>5</Month><Day>27</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2008</Year><Month>11</Month><Day>14</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2008</Year><Month>5</Month><Day>27</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">18501580</ArticleId><ArticleId IdType="pii">S0953-7562(08)00034-8</ArticleId><ArticleId IdType="doi">10.1016/j.mycres.2008.01.011</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Iran</li></country></list><tree><noCountry><name sortKey="Banihashemi, Z" sort="Banihashemi, Z" uniqKey="Banihashemi Z" first="Z" last="Banihashemi">Z. Banihashemi</name><name sortKey="Cooke, D E L" sort="Cooke, D E L" uniqKey="Cooke D" first="D E L" last="Cooke">D E L. Cooke</name></noCountry><country name="Iran"><noRegion><name sortKey="Mostowfizadeh Ghalamfarsa, R" sort="Mostowfizadeh Ghalamfarsa, R" uniqKey="Mostowfizadeh Ghalamfarsa R" first="R" last="Mostowfizadeh-Ghalamfarsa">R. Mostowfizadeh-Ghalamfarsa</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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